CDS

Accession Number TCMCG057C07834
gbkey CDS
Protein Id XP_018471174.1
Location complement(join(31448650..31448811,31448918..31449110,31449212..31449447,31449527..31449699,31450033..31450083,31450187..31450631))
Gene LOC108842687
GeneID 108842687
Organism Raphanus sativus

Protein

Length 419aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018615672.1
Definition PREDICTED: phytoene synthase, chloroplastic isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category I
Description Phytoene synthase
KEGG_TC -
KEGG_Module M00097        [VIEW IN KEGG]
KEGG_Reaction R02065        [VIEW IN KEGG]
R04218        [VIEW IN KEGG]
R07270        [VIEW IN KEGG]
R10177        [VIEW IN KEGG]
KEGG_rclass RC00362        [VIEW IN KEGG]
RC01101        [VIEW IN KEGG]
RC02869        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01006        [VIEW IN KEGG]
KEGG_ko ko:K02291        [VIEW IN KEGG]
EC 2.5.1.32        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
2.5.1.99        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00906        [VIEW IN KEGG]
ko01062        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
map00906        [VIEW IN KEGG]
map01062        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004337        [VIEW IN EMBL-EBI]
GO:0004659        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006720        [VIEW IN EMBL-EBI]
GO:0006721        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008299        [VIEW IN EMBL-EBI]
GO:0008610        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016108        [VIEW IN EMBL-EBI]
GO:0016109        [VIEW IN EMBL-EBI]
GO:0016114        [VIEW IN EMBL-EBI]
GO:0016116        [VIEW IN EMBL-EBI]
GO:0016117        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016765        [VIEW IN EMBL-EBI]
GO:0016767        [VIEW IN EMBL-EBI]
GO:0042440        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044255        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046148        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTATGCAGCAGTGTTATGGGTTGCTGCTTCTTTTCCTAATCCAGACCCAATGACCAATTGTGGTTTGGTAAGAGTTCTAGAATCTTCTAGATTTCTTTCTCCTTGTCTAAATCAGAGAGTCAACAATGGTAGGAGGAGTTCTTCTTCTTCTGTAATGAGCTGCAGAAGGAGAAGATTAAGCAGTGTTGTGTCGTCAAGCATAGTAGCAAGCCCTGCAGGAGAGATAACCCTCTCATCCGAAGAGAAGGTTTACAATGTTGTGCTGAAACAAGCAGCTCTGGTGAACAAACAACTTAGGGACCTTGATGATGATGTGAAGAAACCACAGGATATTACTCTCCCTGGGACTGGGAGTTTTGGGACTGGGAGTTTGAGTTTGTTGGGTGAAGCTTATGATCGATGCGGTGAAGTTTGTGCTGAATATGCTAAAACTTTTTATCTCGGAACTTTGCTTATGACACCTGAGAGACGCAAGGCCATTTGGGCTATCTATGTTTGGTGTAGAAGAACTGATGAACTGGTAGATGGGCCTAATGCATCACACATAACTCCAATGGCGTTAGATAGATGGGAAGCAAGGTTAGAAGATCTTTTCCGTGGCCGTCCTTTCGATATGCTTGACGCTGCCCTCTCTGATACTGTTGCTACATACCCTGTCGATATTCAGCCATTTAGAGACATGATAGAAGGAATGAGAATGGATTTGAGGAAGTCTAGATACAACTCCTTTGATGATCTCTACCTTTACTGCTACTATGTTGCTGGAACCGTTGGTTTGATGAGCGTTCCGGTTATGGGGATCGATCCTAAGTCCAAAGCAACAACCGAGAGTGTTTACAACGCTGCCTTGGCCCTCGGTATAGCCAATCAACTTACCAACATACTCAGAGACGTTGGTGAAGATGCGAGAAGAGGAAGGGTTTATCTACCCCAAGATGAACTAGCTCAGGCTGGTCTCTCAGATGAAGACATATTCGCTGGTAAAGTCACTGATAAATGGAGAAACTTCATGAAAATGCAGCTTAAGCGAGCAAGAATGTTCTTTGATGAAGCTGAGAAAGGTGTTACCGAGCTTGACGCTGCTAGCAGATGGCCCGTATGGGCATCGCTCCTATTGTACAGGAGGATATTGGACGAGATTGAAGCGAATGATTACAACAACTTTACAAAGAGAGCTTATGTGGGGAAAGCCAAGAAAATTGCAGCTTTGCCATTAGCTTATGCTAAATCACTACTCAAGGCTTCAAGTTCAAGATGA
Protein:  
MYAAVLWVAASFPNPDPMTNCGLVRVLESSRFLSPCLNQRVNNGRRSSSSSVMSCRRRRLSSVVSSSIVASPAGEITLSSEEKVYNVVLKQAALVNKQLRDLDDDVKKPQDITLPGTGSFGTGSLSLLGEAYDRCGEVCAEYAKTFYLGTLLMTPERRKAIWAIYVWCRRTDELVDGPNASHITPMALDRWEARLEDLFRGRPFDMLDAALSDTVATYPVDIQPFRDMIEGMRMDLRKSRYNSFDDLYLYCYYVAGTVGLMSVPVMGIDPKSKATTESVYNAALALGIANQLTNILRDVGEDARRGRVYLPQDELAQAGLSDEDIFAGKVTDKWRNFMKMQLKRARMFFDEAEKGVTELDAASRWPVWASLLLYRRILDEIEANDYNNFTKRAYVGKAKKIAALPLAYAKSLLKASSSR